CV

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Education

• Ph.D. in Life Sciences, Weizmann Institute of Science, 2021 (expected)
• M.Sc. in Life Sciences, National Autonomous University of México, 2016
• B.Sc. in Biology, National Autonomous University of México, 2014

Research Experience

• PhD research student: Schraga Schwartz Lab
  • Development of MAZTER-Seq, an anti-body independent method to quantify and map m6A across genomes
  • MAZTER-MINE. A pipeline to analyze MAZTER-Seq derived data.
  • STORM-seq, a technology for simultaneous RNA modifications sequencing
• MSc student: Enrique Hernandez Lemus Lab
  • Pathway Analysis: State of the art. A review article on gene-set enrichment analysis tools.
• BSc student: Claudia Segal Kischinevzky
  • Characterization of an acatalasemic S. cerevisiae complemented with catalases from euryhaline D. hansenii

Publications

txtools: an R package facilitating analysis of RNA modifications, structures, and interactions

Miguel Angel Garcia-Campos, Schraga Schwartz, txtools: an R package facilitating analysis of RNA modifications, structures, and interactions, Nucleic Acids Research, 2024;, gkae203, https://doi.org/10.1093/nar/gkae203.

Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids

Shachar, R., Dierks, D., Garcia-Campos, M. A., Uzonyi, A., Toth, U., Rossmanith, W., & Schwartz, S. (2024). Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter-and intra-species hybrids. Genome Biology, 25(1), 1-29.

txtools: an R package facilitating analysis of RNA modifications, structures, and interactions

Garcia-Campos, M. A., & Schwartz, S. (2023). txtools: an R package facilitating analysis of RNA modifications, structures, and interactions. bioRxiv, 2023-08.

Multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution

Dierks, D., Garcia-Campos, M.A., Uzonyi, A., Safra, M., Edelheit, S., Rossi, A., Sideri, T., Varier, R.A., Brandis, A., Stelzer, Y. and van Werven, F., 2021. Multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution. Nature Methods, pp.1-8.

Tolerance to Oxidative Stress in Budding Yeast by Heterologous Expression of Catalases A and T from Debaryomyces hansenii

González, J., Castillo, R., García-Campos, M. A., Noriega-Samaniego, D., Escobar-Sánchez, V., Romero-Aguilar, L., ... & Segal-Kischinevzky, C. (2020). Tolerance to Oxidative Stress in Budding Yeast by Heterologous Expression of Catalases A and T from Debaryomyces hansenii. Current Microbiology, 77(12), 4000-4015.

Deciphering the “m6A Code” via Antibody-Independent Quantitative Profiling

Garcia-Campos, M. A. et al. (2019) ‘Deciphering the “m6A Code” via Antibody-Independent Quantitative Profiling’, Cell. Elsevier, 0(0). doi: 10.1016/j.cell.2019.06.013.

Deciphering the m6A code via quantitative profiling of m6A at single-nucleotide resolution

Garcia-Campos, M.A., Edelheit, S., Toth, U., Shachar, R., Nir, R., Lasman, L., Brandis, A., Hanna, J.H., Rossmanith, W. and Schwartz, S., 2019. Deciphering the "m6A code" via quantitative profiling of m6A at single-nucleotide resolution. BioRxiv, p.571679.

Pathway Analysis: State of the Art

García-Campos, M.A., Espinal-Enríquez, J. and Hernández-Lemus, E., 2015. Pathway analysis: state of the art. Frontiers in physiology, 6, p.383.

Software

MAZTER-MINE

txtools

Teaching

Principles and practice of large scale data analysis using R 2021-1. (TA)

Principles and practice of large scale data analysis using R 2020-1. (TA)

Principles and practice of large scale data analysis using R 2019-1. (TA)

Principles and practice of large scale data analysis using R 2018-1. (TA)

Talks

Short talk - Deciphering the “m6A Code” via Antibody-Independent Quantitative Profiling

October 24, 2019

Talk at Lola Hall, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel

Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution

December 30, 2018

Talk at Molecular Genetics Department, Weizmann Institute of Science, Rehovot, Israel

Awards

• 2021 - Lady Anne Chain Memorial Prize for academic excellence during Ph.D. studies at the Weizmann Institute of Science.

Service and leadership

• Member of the Happy hour committee in the Molecular Genetics Department. ;)