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Unify lists of txDTs

Usage

tx_unifyTxDTL(
  txDTL,
  geneAnnot = NULL,
  genome = NULL,
  type = "intersection",
  nCores = 1
)

Arguments

txDTL

list. A list of txDTs

geneAnnot

GRanges. Gene annotation as loaded by tx_load_bed().

genome

list. The full reference genome sequences, as loaded by tx_load_genome() or prepackaged by BSgenome, see ?BSgenome::available.genomes

type

character. Set function to apply to genes in the list of txDTs, either 'union' or 'intersection'.

nCores

integer. Number of cores to run the function with. Multicore capability not available in Windows OS.

Value

list